Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 LINC02199-201ENST00000506655 2702 ntBASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 AC103702.1-201ENST00000548801 2630 ntBASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 AC016396.2-201ENST00000562575 1417 ntBASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB1Q9Y5G3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 AC022188.1-201ENST00000620960 1664 ntBASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 KRT18P23-201ENST00000435622 1283 ntBASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 MFAP1P1-201ENST00000442257 1255 ntBASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 TSPY15P-201ENST00000457163 923 ntBASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 MIR3180-4-201ENST00000582223 153 ntBASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB1Q9Y5G3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDHGB1Q9Y5G3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB1Q9Y5G3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB1Q9Y5G3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDHGB1Q9Y5G3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms