Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 BX276092.7-203ENST00000637198 1536 ntBASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 AC133963.1-201ENST00000504166 1679 ntBASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 FAM197Y8-203ENST00000450145 560 ntBASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 LINC01451-201ENST00000623792 534 ntBASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB1Q9Y5F3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB1Q9Y5F3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 LETM1P2-201ENST00000597330 2178 ntBASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AC148477.8-201ENST00000624298 468 ntBASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AC097374.2-201ENST00000618617 1306 ntBASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 AL355312.1-201ENST00000407115 2176 ntBASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB1Q9Y5F3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms