Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 AL662844.1-201ENST00000546340 181 ntBASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 AC011840.4-201ENST00000578471 627 ntBASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 AL353801.3-201ENST00000609898 542 ntBASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 LINC00167-201ENST00000530583 1419 ntBASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB3Q9Y5E6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 AL024508.2-201ENST00000607749 1894 ntBASIC17.27■□□□□ 0.35
PCDHB3Q9Y5E6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 AC141586.5-201ENST00000624546 2050 ntBASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 AC009078.2-202ENST00000463353 338 ntBASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB3Q9Y5E6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms