Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 DBET-201ENST00000630918 3363 ntBASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 PRORSD1P-201ENST00000295112 541 ntBASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 AL160286.2-201ENST00000567150 934 ntBASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH1Q9Y2L9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC079328.2-201ENST00000561241 3354 ntBASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC008687.6-201ENST00000596318 630 ntBASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC073648.6-201ENST00000641589 218 ntBASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 AC116353.5-201ENST00000638148 1699 ntBASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRCH1Q9Y2L9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 AL365203.3-201ENST00000609742 2057 ntBASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH1Q9Y2L9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 873 ms