Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 Z83836.1-201ENST00000624605 1642 ntBASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 AC116353.5-201ENST00000638148 1699 ntBASIC18.22■□□□□ 0.51
R3HDM2Q9Y2K5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 AL139327.4-201ENST00000612362 153 ntBASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 AC016396.2-201ENST00000562575 1417 ntBASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 BCL2-203ENST00000589955 5011 ntBASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HDM2Q9Y2K5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
R3HDM2Q9Y2K5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 SLC25A1P3-201ENST00000395415 828 ntBASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AC211429.1-201ENST00000415277 523 ntBASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AK4P3-201ENST00000418260 669 ntBASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 HOMER2P1-201ENST00000455653 964 ntBASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 AC011270.2-201ENST00000624293 2550 ntBASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
R3HDM2Q9Y2K5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 AC046185.3-201ENST00000623228 1824 ntBASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 AGGF1P2-201ENST00000426656 2106 ntBASIC18.19■□□□□ 0.5
R3HDM2Q9Y2K5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms