Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AL133373.2-201ENST00000623187 2828 ntBASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 KRT18P65-201ENST00000439811 1286 ntBASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AL138831.2-201ENST00000606564 490 ntBASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AF228730.7-201ENST00000641842 219 ntBASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.27■□□□□ 0.19
NPIPA1Q9UND3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 RNPS1P1-201ENST00000507437 918 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 AC073648.2-201ENST00000510116 352 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 RNA5SP419-201ENST00000515908 135 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 AC023511.2-201ENST00000618803 211 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 AL355877.3-201ENST00000622820 899 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 AC093010.1-201ENST00000473625 1624 ntBASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPA1Q9UND3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 RBM17P3-201ENST00000417687 1192 ntBASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AP001269.4-201ENST00000609611 512 ntBASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 AC125634.1-201ENST00000438758 1403 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms