Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 AL592071.1-201ENST00000611956 408 ntBASIC17.54■□□□□ 0.4
TSR3Q9UJK0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC068472.1-201ENST00000474589 881 ntBASIC17.53■□□□□ 0.4
TSR3Q9UJK0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSR3Q9UJK0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PP12613-201ENST00000424958 2230 ntBASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
TSR3Q9UJK0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 BX276092.5-203ENST00000456199 560 ntBASIC17.52■□□□□ 0.4
TSR3Q9UJK0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 AC093458.2-201ENST00000623150 629 ntBASIC17.52■□□□□ 0.4
TSR3Q9UJK0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.52■□□□□ 0.4
TSR3Q9UJK0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TSR3Q9UJK0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms