Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 DDX43P3-201ENST00000441064 443 ntBASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 YBX1P5-201ENST00000509441 847 ntBASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 AC007613.1-201ENST00000572811 2597 ntBASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 AC097637.2-201ENST00000624096 1997 ntBASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 IGHV3-52-201ENST00000519770 353 ntBASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 MIR4469-201ENST00000583919 79 ntBASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 AC009336.1-201ENST00000608941 1553 ntBASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNMT3BQ9UBC3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 IGLL3P-201ENST00000412472 434 ntBASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 AL805961.1-202ENST00000641562 540 ntBASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms