Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTN3Q9P232 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTN3Q9P232 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTN3Q9P232 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 KRT18P27-201ENST00000427733 1299 ntBASIC18.91■□□□□ 0.62
CNTN3Q9P232 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 IGHV3-22-201ENST00000520721 359 ntBASIC18.91■□□□□ 0.62
CNTN3Q9P232 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 LINC01451-201ENST00000623792 534 ntBASIC18.91■□□□□ 0.62
CNTN3Q9P232 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CNTN3Q9P232 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTN3Q9P232 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 SLC25A1P1-201ENST00000528351 927 ntBASIC18.9■□□□□ 0.62
CNTN3Q9P232 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 AC105339.3-201ENST00000560043 636 ntBASIC18.9■□□□□ 0.62
CNTN3Q9P232 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTN3Q9P232 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 LINC00304-203ENST00000565008 1864 ntBASIC18.9■□□□□ 0.62
CNTN3Q9P232 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTN3Q9P232 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.89■□□□□ 0.62
CNTN3Q9P232 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CNTN3Q9P232 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNTN3Q9P232 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTN3Q9P232 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 AC006557.2-201ENST00000592985 1240 ntBASIC18.89■□□□□ 0.61
CNTN3Q9P232 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTN3Q9P232 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTN3Q9P232 AC012317.2-201ENST00000623305 2251 ntBASIC18.89■□□□□ 0.61
CNTN3Q9P232 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTN3Q9P232 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNTN3Q9P232 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CNTN3Q9P232 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTN3Q9P232 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CNTN3Q9P232 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTN3Q9P232 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTN3Q9P232 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNTN3Q9P232 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTN3Q9P232 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTN3Q9P232 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTN3Q9P232 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms