Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 KRT126P-201ENST00000549467 1181 ntBASIC16.49■□□□□ 0.23
CNIH4Q9P003 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 AC080080.1-201ENST00000625121 2420 ntBASIC16.49■□□□□ 0.23
CNIH4Q9P003 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNIH4Q9P003 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH4Q9P003 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AC022898.2-201ENST00000616822 1312 ntBASIC16.48■□□□□ 0.23
CNIH4Q9P003 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 IGHV3-47-201ENST00000425060 335 ntBASIC16.48■□□□□ 0.23
CNIH4Q9P003 DUSP5P1-201ENST00000441325 1139 ntBASIC16.48■□□□□ 0.23
CNIH4Q9P003 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 AL121772.3-201ENST00000610840 674 ntBASIC16.48■□□□□ 0.23
CNIH4Q9P003 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH4Q9P003 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH4Q9P003 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 AL845331.1-201ENST00000424978 1190 ntBASIC16.47■□□□□ 0.23
CNIH4Q9P003 AL450487.1-201ENST00000426799 995 ntBASIC16.47■□□□□ 0.23
CNIH4Q9P003 MINOS1P3-201ENST00000457048 203 ntBASIC16.47■□□□□ 0.23
CNIH4Q9P003 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH4Q9P003 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.47■□□□□ 0.23
CNIH4Q9P003 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms