Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 MIR3652-201ENST00000579335 131 ntBASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AP000867.4-201ENST00000641616 219 ntBASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 AC111152.3-201ENST00000569699 673 ntBASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BLOC1S4Q9NUP1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 KRT16P4-201ENST00000453883 522 ntBASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 AC073592.5-201ENST00000624854 528 ntBASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BLOC1S4Q9NUP1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 AC016396.2-201ENST00000562575 1417 ntBASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 AC046185.3-201ENST00000623228 1824 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms