Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AP001269.4-201ENST00000609611 512 ntBASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AC073592.5-201ENST00000624854 528 ntBASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ECHDC1Q9NTX5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 AC106795.1-205ENST00000512851 1056 ntBASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.41■■□□□ 1.02
ECHDC1Q9NTX5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 AP005117.1-201ENST00000584346 1413 ntBASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 AC003669.1-201ENST00000334569 611 ntBASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 UNC93B7-201ENST00000509439 705 ntBASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms