Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CISHQ9NSE2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CISHQ9NSE2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CISHQ9NSE2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CISHQ9NSE2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.77■□□□□ 0.59
CISHQ9NSE2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 AL138688.1-201ENST00000624851 1594 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 FZD10-202ENST00000539839 3282 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 MYCLP1-201ENST00000372451 1075 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 AC132008.2-207ENST00000454517 770 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 AL139327.4-201ENST00000612362 153 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 AC090340.1-201ENST00000620778 4980 ntBASIC18.76■□□□□ 0.59
CISHQ9NSE2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CISHQ9NSE2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.76■□□□□ 0.59
CISHQ9NSE2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 DUSP5P1-201ENST00000441325 1139 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 ABCD1P5-201ENST00000445663 754 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 STK25P1-201ENST00000585406 838 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 AP000867.4-201ENST00000641616 219 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 PMPCAP1-201ENST00000508114 1576 ntBASIC18.75■□□□□ 0.59
CISHQ9NSE2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.75■□□□□ 0.59
CISHQ9NSE2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CISHQ9NSE2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.74■□□□□ 0.59
CISHQ9NSE2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 AC132938.5-201ENST00000624980 1813 ntBASIC18.74■□□□□ 0.59
CISHQ9NSE2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.74■□□□□ 0.59
CISHQ9NSE2 AC026471.1-201ENST00000564629 3026 ntBASIC18.74■□□□□ 0.59
CISHQ9NSE2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.74■□□□□ 0.59
CISHQ9NSE2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CISHQ9NSE2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CISHQ9NSE2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CISHQ9NSE2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms