Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 LINC00552-201ENST00000625151 2579 ntBASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 HLA-DQB2-231ENST00000435145 2026 ntBASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 CES1P1-201ENST00000421606 1704 ntBASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AL031602.1-201ENST00000633169 911 ntBASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42SE1Q9NRR8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms