Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL845331.1-201ENST00000424978 1190 ntBASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 DRAXINP1-201ENST00000437611 948 ntBASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 AC068472.1-201ENST00000474589 881 ntBASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
NECTIN3Q9NQS3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 AL139384.1-201ENST00000612143 3047 ntBASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 TOB2P1-201ENST00000469761 992 ntBASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NECTIN3Q9NQS3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NECTIN3Q9NQS3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.89■□□□□ 0.3
NECTIN3Q9NQS3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NECTIN3Q9NQS3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 AC091607.1-201ENST00000490318 1060 ntBASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NECTIN3Q9NQS3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms