Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AL441883.1-201ENST00000566170 1045 ntBASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC52A3Q9NQ40 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
SLC52A3Q9NQ40 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC52A3Q9NQ40 AL353692.3-201ENST00000407031 1396 ntBASIC16.64■□□□□ 0.26
SLC52A3Q9NQ40 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
SLC52A3Q9NQ40 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SLC52A3Q9NQ40 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 DOC2GP-204ENST00000639052 2548 ntBASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 MIR662-201ENST00000384847 95 ntBASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 AC019129.2-201ENST00000609837 1235 ntBASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC52A3Q9NQ40 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 AC092171.3-201ENST00000610122 2651 ntBASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 AC092597.1-201ENST00000487352 616 ntBASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms