Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AC084018.2-201ENST00000613093 2607 ntBASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MIR1233-2-201ENST00000408138 82 ntBASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MIR1233-1-201ENST00000408722 82 ntBASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AC106730.1-201ENST00000566722 1090 ntBASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR1BQ9H9Y6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR1BQ9H9Y6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
POLR1BQ9H9Y6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR1BQ9H9Y6 GNAS-203ENST00000306120 1878 ntBASIC17.46■□□□□ 0.38
POLR1BQ9H9Y6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC134043.2-201ENST00000624206 2238 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC096582.2-201ENST00000510860 516 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC008608.2-201ENST00000606089 416 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AC148477.8-201ENST00000624298 468 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 PMS2P7-201ENST00000506558 1336 ntBASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR1BQ9H9Y6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms