Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 AC002558.1-201ENST00000488906 803 ntBASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 AC011840.4-201ENST00000578471 627 ntBASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 AC005332.1-201ENST00000577698 1310 ntBASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC40Q9H9A6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 AC125634.1-201ENST00000438758 1403 ntBASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC40Q9H9A6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 AL845331.1-201ENST00000424978 1190 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 AC007967.3-201ENST00000434308 558 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 BX276092.5-203ENST00000456199 560 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 FAM86EP-206ENST00000510506 987 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 AL121672.3-201ENST00000608644 468 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 AL590326.2-201ENST00000625139 305 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 LYSMD4-203ENST00000378904 2122 ntBASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC40Q9H9A6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AP001094.4-201ENST00000579008 2176 ntBASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms