Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 STARP1-201ENST00000397973 869 ntBASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2J3Q9H1A7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 TSPY12P-201ENST00000421279 868 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 AC005104.2-201ENST00000427818 678 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ATP5G1P1-201ENST00000448724 379 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 AC079602.3-201ENST00000623931 403 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 AL023973.1-201ENST00000624619 620 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2J3Q9H1A7 AC016396.2-201ENST00000562575 1417 ntBASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms