Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
COMMD4Q9H0A8 REXO1L11P-201ENST00000620964 1927 ntBASIC15.58■□□□□ 0.09
COMMD4Q9H0A8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD4Q9H0A8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD4Q9H0A8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD4Q9H0A8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 EGLN1P1-201ENST00000531623 762 ntBASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 NEK4P2-201ENST00000580004 1012 ntBASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
COMMD4Q9H0A8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 AP000523.1-201ENST00000398242 1049 ntBASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 KRT18P65-201ENST00000439811 1286 ntBASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 KRT17P2-201ENST00000300992 1314 ntBASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 AC016396.2-201ENST00000562575 1417 ntBASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD4Q9H0A8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms