Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AL390719.2-201ENST00000606993 987 ntBASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC139713.2-201ENST00000641328 2723 ntBASIC16.24■□□□□ 0.19
TRIM2Q9C040 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 VENTXP5-201ENST00000523979 775 ntBASIC16.23■□□□□ 0.19
TRIM2Q9C040 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 AC141586.5-201ENST00000624546 2050 ntBASIC16.23■□□□□ 0.19
TRIM2Q9C040 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM2Q9C040 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM2Q9C040 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 PP12613-201ENST00000424958 2230 ntBASIC16.22■□□□□ 0.19
TRIM2Q9C040 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 IER3-202ENST00000376377 1350 ntBASIC16.22■□□□□ 0.19
TRIM2Q9C040 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM2Q9C040 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM2Q9C040 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 FER1L4-210ENST00000615531 5998 ntBASIC16.21■□□□□ 0.19
TRIM2Q9C040 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 Z83836.1-201ENST00000624605 1642 ntBASIC16.21■□□□□ 0.19
TRIM2Q9C040 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM2Q9C040 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM2Q9C040 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms