Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 PVRIG2P-201ENST00000435460 978 ntBASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 MIR3917-201ENST00000580971 93 ntBASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXP3Q9BZS1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AL450487.1-201ENST00000426799 995 ntBASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 KRT18P65-201ENST00000439811 1286 ntBASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FOXP3Q9BZS1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXP3Q9BZS1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms