Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC007919.2-201ENST00000444110 511 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC142381.4-202ENST00000563973 229 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AP000525.1-201ENST00000608286 694 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AP001412.1-201ENST00000608405 714 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC006213.5-201ENST00000619673 288 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC010653.2-201ENST00000623505 997 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AL157888.1-201ENST00000631930 593 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC009452.1-201ENST00000640823 606 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC078925.2-201ENST00000624013 1973 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC090340.1-201ENST00000620778 4980 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 LINC02012-201ENST00000608206 1725 ntBASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 UNC93B2-201ENST00000285383 730 ntBASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 UBE2SP1-201ENST00000450587 669 ntBASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC098590.1-201ENST00000468126 897 ntBASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 AC008741.2-201ENST00000612792 3115 ntBASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP3-1Q9BYR8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms