Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AC008267.7-201ENST00000624570 1194 ntBASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 AC233723.2-201ENST00000623798 2106 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 CTBP2P5-201ENST00000454986 1264 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 KRT8P13-201ENST00000463294 1010 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 DOC2GP-202ENST00000514950 1163 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 TEX28P1-201ENST00000613479 1221 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 TEX28P2-201ENST00000617764 1221 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 MIR7845-201ENST00000618396 99 ntBASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL25A1Q9BXS0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL25A1Q9BXS0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL25A1Q9BXS0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL25A1Q9BXS0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.58■□□□□ 0.41
COL25A1Q9BXS0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL25A1Q9BXS0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC104457.1-201ENST00000401024 814 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC099336.1-201ENST00000417053 1171 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 NUS1P3-201ENST00000423502 862 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 C2orf69P2-201ENST00000562032 1123 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC027307.2-201ENST00000591252 911 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AL365330.1-201ENST00000607459 531 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC004790.1-201ENST00000612686 536 ntBASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.58■□□□□ 0.4
COL25A1Q9BXS0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC020907.5-201ENST00000624372 1936 ntBASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms