Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHANK2-AS3Q9BTD1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 FAM8A6P-201ENST00000407496 1135 ntBASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 HLA-F-220ENST00000434407 884 ntBASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC145285.6-201ENST00000604632 637 ntBASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AL139327.4-201ENST00000612362 153 ntBASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC116353.5-201ENST00000638148 1699 ntBASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms