Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 AC133963.1-201ENST00000504166 1679 ntBASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
NIPSNAP3BQ9BS92 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 AL365209.1-201ENST00000624418 6473 ntBASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 AL357033.4-201ENST00000617703 1807 ntBASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 NBPF21P-201ENST00000425093 1451 ntBASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 AL359736.2-201ENST00000621992 437 ntBASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 AC092850.2-201ENST00000623821 2697 ntBASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NIPSNAP3BQ9BS92 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 PHGDH-209ENST00000641074 1780 ntBASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 KRASP1-201ENST00000407852 552 ntBASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 UBE2SP1-201ENST00000450587 669 ntBASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.12□□□□□ -0.15
NIPSNAP3BQ9BS92 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms