Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
VGLL1Q99990 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VGLL1Q99990 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 SNORA78-201ENST00000459373 127 ntBASIC13.39□□□□□ -0.27
VGLL1Q99990 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.39□□□□□ -0.27
VGLL1Q99990 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.39□□□□□ -0.27
VGLL1Q99990 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
VGLL1Q99990 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.39□□□□□ -0.27
VGLL1Q99990 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 AC007326.2-201ENST00000624224 7579 ntBASIC13.39□□□□□ -0.27
VGLL1Q99990 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.39□□□□□ -0.27
VGLL1Q99990 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VGLL1Q99990 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VGLL1Q99990 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VGLL1Q99990 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.39□□□□□ -0.27
VGLL1Q99990 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 PVRIG2P-201ENST00000435460 978 ntBASIC13.38□□□□□ -0.27
VGLL1Q99990 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.38□□□□□ -0.27
VGLL1Q99990 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.38□□□□□ -0.27
VGLL1Q99990 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.38□□□□□ -0.27
VGLL1Q99990 LINC01451-201ENST00000623792 534 ntBASIC13.38□□□□□ -0.27
VGLL1Q99990 AL157888.1-201ENST00000631930 593 ntBASIC13.38□□□□□ -0.27
VGLL1Q99990 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.38□□□□□ -0.27
VGLL1Q99990 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.38□□□□□ -0.27
VGLL1Q99990 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VGLL1Q99990 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
VGLL1Q99990 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.38□□□□□ -0.27
VGLL1Q99990 KRT8P9-201ENST00000558927 1449 ntBASIC13.38□□□□□ -0.27
VGLL1Q99990 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VGLL1Q99990 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VGLL1Q99990 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.37□□□□□ -0.27
VGLL1Q99990 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.37□□□□□ -0.27
VGLL1Q99990 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms