Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PTPN18Q99952 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN18Q99952 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PTPN18Q99952 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN18Q99952 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN18Q99952 FO538757.1-201ENST00000623083 1397 ntBASIC20.01■□□□□ 0.79
PTPN18Q99952 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN18Q99952 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN18Q99952 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN18Q99952 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.01■□□□□ 0.79
PTPN18Q99952 LINC02560-201ENST00000596379 459 ntBASIC20.01■□□□□ 0.79
PTPN18Q99952 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN18Q99952 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PTPN18Q99952 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN18Q99952 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PTPN18Q99952 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20■□□□□ 0.79
PTPN18Q99952 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 WRB-204ENST00000398753 699 ntTSL 3 BASIC20■□□□□ 0.79
PTPN18Q99952 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20■□□□□ 0.79
PTPN18Q99952 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20■□□□□ 0.79
PTPN18Q99952 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20■□□□□ 0.79
PTPN18Q99952 AP005018.1-201ENST00000525475 301 ntBASIC20■□□□□ 0.79
PTPN18Q99952 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20■□□□□ 0.79
PTPN18Q99952 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20■□□□□ 0.79
PTPN18Q99952 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20■□□□□ 0.79
PTPN18Q99952 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 AC008761.3-201ENST00000624803 892 ntBASIC20■□□□□ 0.79
PTPN18Q99952 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN18Q99952 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20■□□□□ 0.79
PTPN18Q99952 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PTPN18Q99952 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN18Q99952 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PTPN18Q99952 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN18Q99952 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN18Q99952 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN18Q99952 KRT18P32-201ENST00000424695 1287 ntBASIC19.99■□□□□ 0.79
PTPN18Q99952 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN18Q99952 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN18Q99952 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 AC116407.2-201ENST00000613639 860 ntBASIC19.99■□□□□ 0.79
PTPN18Q99952 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PTPN18Q99952 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN18Q99952 AC073592.3-201ENST00000625118 1834 ntBASIC19.99■□□□□ 0.79
PTPN18Q99952 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN18Q99952 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN18Q99952 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN18Q99952 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN18Q99952 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN18Q99952 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN18Q99952 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN18Q99952 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms