Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SMOQ99835 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
SMOQ99835 SIGLEC30P-201ENST00000455569 941 ntBASIC18.43■□□□□ 0.54
SMOQ99835 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.43■□□□□ 0.54
SMOQ99835 AC079776.4-201ENST00000511039 504 ntBASIC18.43■□□□□ 0.54
SMOQ99835 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.43■□□□□ 0.54
SMOQ99835 OR7E14P-202ENST00000530490 1290 ntBASIC18.43■□□□□ 0.54
SMOQ99835 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.43■□□□□ 0.54
SMOQ99835 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.43■□□□□ 0.54
SMOQ99835 AL139327.4-201ENST00000612362 153 ntBASIC18.43■□□□□ 0.54
SMOQ99835 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.43■□□□□ 0.54
SMOQ99835 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
SMOQ99835 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SMOQ99835 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMOQ99835 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SMOQ99835 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.42■□□□□ 0.54
SMOQ99835 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 AC012640.2-201ENST00000561606 901 ntBASIC18.42■□□□□ 0.54
SMOQ99835 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.42■□□□□ 0.54
SMOQ99835 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 AC107918.4-202ENST00000641623 219 ntBASIC18.42■□□□□ 0.54
SMOQ99835 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.42■□□□□ 0.54
SMOQ99835 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.42■□□□□ 0.54
SMOQ99835 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMOQ99835 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMOQ99835 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SMOQ99835 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.41■□□□□ 0.54
SMOQ99835 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.41■□□□□ 0.54
SMOQ99835 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMOQ99835 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.41■□□□□ 0.54
SMOQ99835 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.41■□□□□ 0.54
SMOQ99835 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.41■□□□□ 0.54
SMOQ99835 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.41■□□□□ 0.54
SMOQ99835 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.41■□□□□ 0.54
SMOQ99835 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.41■□□□□ 0.54
SMOQ99835 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.41■□□□□ 0.54
SMOQ99835 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMOQ99835 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SMOQ99835 LYSMD4-203ENST00000378904 2122 ntBASIC18.41■□□□□ 0.54
SMOQ99835 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SMOQ99835 GNAS-203ENST00000306120 1878 ntBASIC18.41■□□□□ 0.54
SMOQ99835 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.41■□□□□ 0.54
SMOQ99835 AC243591.1-201ENST00000452967 1364 ntBASIC18.41■□□□□ 0.54
SMOQ99835 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.4■□□□□ 0.54
SMOQ99835 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SMOQ99835 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms