Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 AL109659.2-201ENST00000606809 1674 ntBASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 AC011676.5-201ENST00000624864 2660 ntBASIC13.36□□□□□ -0.27
AP1S3Q96PC3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 KRASP1-201ENST00000407852 552 ntBASIC13.35□□□□□ -0.27
AP1S3Q96PC3 AC004951.3-201ENST00000418645 1148 ntBASIC13.35□□□□□ -0.27
AP1S3Q96PC3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 MTDHP1-201ENST00000605323 784 ntBASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 MYO15B-237ENST00000642007 4893 ntBASIC13.35□□□□□ -0.27
AP1S3Q96PC3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AP1S3Q96PC3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms