Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX27Q96L92 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SNX27Q96L92 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 MYCLP1-201ENST00000372451 1075 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.96■□□□□ 0.63
SNX27Q96L92 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 STK19B-204ENST00000512515 211 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 AC116407.3-201ENST00000623905 1129 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SNX27Q96L92 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 AC009336.1-201ENST00000608941 1553 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX27Q96L92 HLA-J-201ENST00000462773 1622 ntBASIC18.96■□□□□ 0.63
SNX27Q96L92 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX27Q96L92 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX27Q96L92 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SNX27Q96L92 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX27Q96L92 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 RPS8P6-201ENST00000426177 609 ntBASIC18.95■□□□□ 0.62
SNX27Q96L92 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.95■□□□□ 0.62
SNX27Q96L92 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.95■□□□□ 0.62
SNX27Q96L92 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.95■□□□□ 0.62
SNX27Q96L92 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SNX27Q96L92 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SNX27Q96L92 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX27Q96L92 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX27Q96L92 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX27Q96L92 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 AC012317.2-201ENST00000623305 2251 ntBASIC18.94■□□□□ 0.62
SNX27Q96L92 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNX27Q96L92 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SNX27Q96L92 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.94■□□□□ 0.62
SNX27Q96L92 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX27Q96L92 SIGLEC30P-201ENST00000455569 941 ntBASIC18.94■□□□□ 0.62
SNX27Q96L92 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNX27Q96L92 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.94■□□□□ 0.62
SNX27Q96L92 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX27Q96L92 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX27Q96L92 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
SNX27Q96L92 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX27Q96L92 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 NOC2LP1-202ENST00000452600 2235 ntBASIC18.93■□□□□ 0.62
SNX27Q96L92 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SNX27Q96L92 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms