Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHCHD1Q96BP2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHCHD1Q96BP2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.83□□□□□ -0.35
CHCHD1Q96BP2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CHCHD1Q96BP2 AL163051.1-201ENST00000569214 1512 ntBASIC12.83□□□□□ -0.35
CHCHD1Q96BP2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 AL512625.2-201ENST00000417533 625 ntBASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.83□□□□□ -0.36
CHCHD1Q96BP2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 LINC02012-201ENST00000608206 1725 ntBASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 REXO1L11P-201ENST00000620964 1927 ntBASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHCHD1Q96BP2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms