Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SHC3Q92529 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.77■□□□□ 0.59
SHC3Q92529 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHC3Q92529 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
SHC3Q92529 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SHC3Q92529 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SHC3Q92529 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SHC3Q92529 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.76■□□□□ 0.59
SHC3Q92529 STK25P1-201ENST00000585406 838 ntBASIC18.76■□□□□ 0.59
SHC3Q92529 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.76■□□□□ 0.59
SHC3Q92529 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SHC3Q92529 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC3Q92529 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHC3Q92529 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC3Q92529 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 AC080080.1-201ENST00000625121 2420 ntBASIC18.75■□□□□ 0.59
SHC3Q92529 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 INTS4P1-201ENST00000438455 1935 ntBASIC18.75■□□□□ 0.59
SHC3Q92529 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
SHC3Q92529 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.75■□□□□ 0.59
SHC3Q92529 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.75■□□□□ 0.59
SHC3Q92529 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC3Q92529 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC3Q92529 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SHC3Q92529 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SHC3Q92529 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SHC3Q92529 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC3Q92529 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC3Q92529 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SHC3Q92529 SLC25A1P3-201ENST00000395415 828 ntBASIC18.74■□□□□ 0.59
SHC3Q92529 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SHC3Q92529 MINOS1P3-201ENST00000457048 203 ntBASIC18.74■□□□□ 0.59
SHC3Q92529 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.74■□□□□ 0.59
SHC3Q92529 AC111152.3-201ENST00000569699 673 ntBASIC18.74■□□□□ 0.59
SHC3Q92529 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SHC3Q92529 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC3Q92529 AC092119.3-201ENST00000612618 583 ntBASIC18.74■□□□□ 0.59
SHC3Q92529 AD001527.2-201ENST00000622994 785 ntBASIC18.74■□□□□ 0.59
SHC3Q92529 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms