Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 AC073508.3-201ENST00000619697 1419 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 BX664615.1-201ENST00000443558 458 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 MTCL1P1-201ENST00000446207 792 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 VENTXP5-201ENST00000523979 775 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ZNF444P1-201ENST00000559497 298 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 AC005363.2-201ENST00000618631 242 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 PKD1P1-201ENST00000458669 6805 ntBASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATG4AQ8WYN0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 MIR662-201ENST00000384847 95 ntBASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 AC005104.2-201ENST00000427818 678 ntBASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 KRT18P57-201ENST00000443599 1254 ntBASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 AC068472.1-201ENST00000474589 881 ntBASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATG4AQ8WYN0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 HBZP1-201ENST00000354915 429 ntBASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 AC005521.1-201ENST00000393351 872 ntBASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 AL359075.1-203ENST00000462729 1002 ntBASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 GPR32P1-201ENST00000601788 811 ntBASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 AC097493.4-201ENST00000641197 219 ntBASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATG4AQ8WYN0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATG4AQ8WYN0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATG4AQ8WYN0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ATG4AQ8WYN0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.23■□□□□ 0.51
ATG4AQ8WYN0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms