Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM3Q8TF72 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 STK19B-204ENST00000512515 211 ntBASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AC008608.2-201ENST00000606089 416 ntBASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AC011467.2-201ENST00000598425 242 ntBASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AP005117.1-201ENST00000584346 1413 ntBASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM3Q8TF72 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 AC012313.1-201ENST00000593393 3059 ntBASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 HLA-A-201ENST00000376802 1334 ntBASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 ABCD1P5-201ENST00000445663 754 ntBASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.9■□□□□ 0.46
SHROOM3Q8TF72 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 AC080080.1-201ENST00000625121 2420 ntBASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
SHROOM3Q8TF72 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 KRT18P13-201ENST00000400056 1290 ntBASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 ACTG1P4-201ENST00000425123 1122 ntBASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms