Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 AC004870.1-201ENST00000315132 882 ntBASIC21.68■■□□□ 1.06
SSH3Q8TE77 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 BX005266.1-201ENST00000473402 457 ntBASIC21.67■■□□□ 1.06
SSH3Q8TE77 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSH3Q8TE77 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.67■■□□□ 1.06
SSH3Q8TE77 AL135999.2-201ENST00000622438 1686 ntBASIC21.66■■□□□ 1.06
SSH3Q8TE77 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 SIGLEC30P-201ENST00000455569 941 ntBASIC21.66■■□□□ 1.06
SSH3Q8TE77 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSH3Q8TE77 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSH3Q8TE77 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 CROCCP2-202ENST00000412962 2773 ntBASIC21.65■■□□□ 1.06
SSH3Q8TE77 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 SLC25A1P3-201ENST00000395415 828 ntBASIC21.65■■□□□ 1.06
SSH3Q8TE77 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 AC021087.4-201ENST00000563761 564 ntBASIC21.65■■□□□ 1.06
SSH3Q8TE77 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 AL022326.1-202ENST00000641533 845 ntBASIC21.65■■□□□ 1.06
SSH3Q8TE77 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSH3Q8TE77 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.65■■□□□ 1.06
SSH3Q8TE77 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms