Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.58■□□□□ 0.41
RAB3IL1Q8TBN0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 AL023803.3-201ENST00000615559 522 ntBASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 AC063926.3-201ENST00000624734 5658 ntBASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAB3IL1Q8TBN0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 SLC25A1P2-201ENST00000430693 912 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 TSPY17P-201ENST00000450329 467 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 RPPH1-201ENST00000516869 333 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AP003041.3-201ENST00000527151 707 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AP005242.2-201ENST00000580065 1175 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 FAM197Y4-202ENST00000622692 608 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 AC106886.4-201ENST00000623557 2502 ntBASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IL1Q8TBN0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 AC009949.1-201ENST00000623048 1830 ntBASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IL1Q8TBN0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms