Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 AC073592.5-201ENST00000624854 528 ntBASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AL096828.2-201ENST00000567259 1965 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 KRT18P27-201ENST00000427733 1299 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC103564.2-201ENST00000432853 1299 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AL591424.1-201ENST00000442569 1213 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 AC020763.4-201ENST00000623414 4170 ntBASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHKBP1Q8TBC3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.46■□□□□ 0.54
SHKBP1Q8TBC3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHKBP1Q8TBC3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 AC020916.1-201ENST00000587762 1774 ntBASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 KRT18P3-201ENST00000451602 1288 ntBASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 PRYP5-201ENST00000451909 266 ntBASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHKBP1Q8TBC3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms