Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 AC111152.3-201ENST00000569699 673 ntBASIC18.83■□□□□ 0.6
LMO3Q8TAP4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 AC093458.2-201ENST00000623150 629 ntBASIC18.83■□□□□ 0.6
LMO3Q8TAP4 AP000867.4-201ENST00000641616 219 ntBASIC18.83■□□□□ 0.6
LMO3Q8TAP4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
LMO3Q8TAP4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.82■□□□□ 0.6
LMO3Q8TAP4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 UPK3BP1-201ENST00000428678 509 ntBASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 AC106820.2-201ENST00000563775 3264 ntBASIC18.82■□□□□ 0.6
LMO3Q8TAP4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LMO3Q8TAP4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 AC009336.1-201ENST00000608941 1553 ntBASIC18.81■□□□□ 0.6
LMO3Q8TAP4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 MIR5100-201ENST00000579544 119 ntBASIC18.81■□□□□ 0.6
LMO3Q8TAP4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 AC099336.1-202ENST00000602961 463 ntBASIC18.81■□□□□ 0.6
LMO3Q8TAP4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LMO3Q8TAP4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms