Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AL022342.1-201ENST00000400363 863 ntBASIC18.93■□□□□ 0.62
BEST2Q8NFU1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AP001005.1-201ENST00000571755 1248 ntBASIC18.93■□□□□ 0.62
BEST2Q8NFU1 STK25P1-201ENST00000585406 838 ntBASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AL022326.1-202ENST00000641533 845 ntBASIC18.93■□□□□ 0.62
BEST2Q8NFU1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 AC006116.8-202ENST00000587620 1550 ntBASIC18.93■□□□□ 0.62
BEST2Q8NFU1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST2Q8NFU1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 RPS2P28-201ENST00000314255 741 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 AL031284.1-201ENST00000419297 478 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 STK19B-204ENST00000512515 211 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 MTDHP4-201ENST00000600287 670 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 LINC01451-201ENST00000623792 534 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 AC148477.8-201ENST00000624298 468 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BEST2Q8NFU1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.92■□□□□ 0.62
BEST2Q8NFU1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 AC079776.4-201ENST00000511039 504 ntBASIC18.91■□□□□ 0.62
BEST2Q8NFU1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.91■□□□□ 0.62
BEST2Q8NFU1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms