Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC093214.1-201ENST00000511688 1107 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC005225.4-201ENST00000557330 545 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC096734.2-201ENST00000562054 433 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 BAD-202ENST00000394531 631 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC015922.1-201ENST00000421102 1152 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AL353135.1-201ENST00000606729 504 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AC105339.1-204ENST00000636249 355 ntBASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 AC006116.8-202ENST00000587620 1550 ntBASIC27.29■■□□□ 1.96
CFAP43Q8NDM7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 ABALON-201ENST00000629058 1903 ntBASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP43Q8NDM7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 OR7E47P-204ENST00000575924 449 ntBASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 AC067863.1-201ENST00000494933 530 ntBASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP43Q8NDM7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC27.26■■□□□ 1.96
CFAP43Q8NDM7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
CFAP43Q8NDM7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 MIR661-201ENST00000384842 89 ntBASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 LINC00628-201ENST00000628516 1289 ntBASIC27.26■■□□□ 1.95
CFAP43Q8NDM7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms