Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 AL033527.4-201ENST00000641026 673 ntBASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CCDC168Q8NDH2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AC079776.1-201ENST00000401540 1152 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AL355306.1-201ENST00000415580 579 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AL353593.2-201ENST00000602529 1483 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AL512638.1-201ENST00000457493 794 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 GNAS-203ENST00000306120 1878 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 AC097637.2-201ENST00000624096 1997 ntBASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC168Q8NDH2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 AC243562.1-201ENST00000560672 389 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 UXT-AS1-201ENST00000590504 1525 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 TSSK5P-201ENST00000423978 907 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 AL671277.1-201ENST00000429656 993 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 CXCL1P1-201ENST00000502804 216 ntBASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms