Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 AC135776.1-201ENST00000319817 2481 ntBASIC19.66■□□□□ 0.74
USP38Q8NB14 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.66■□□□□ 0.74
USP38Q8NB14 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP38Q8NB14 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP38Q8NB14 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
USP38Q8NB14 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP38Q8NB14 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP38Q8NB14 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.65■□□□□ 0.74
USP38Q8NB14 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.65■□□□□ 0.74
USP38Q8NB14 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.65■□□□□ 0.74
USP38Q8NB14 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP38Q8NB14 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP38Q8NB14 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP38Q8NB14 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP38Q8NB14 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
USP38Q8NB14 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
USP38Q8NB14 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP38Q8NB14 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP38Q8NB14 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP38Q8NB14 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
USP38Q8NB14 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
USP38Q8NB14 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP38Q8NB14 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
USP38Q8NB14 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
USP38Q8NB14 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.63■□□□□ 0.73
USP38Q8NB14 AL356309.3-201ENST00000624132 1934 ntBASIC19.63■□□□□ 0.73
USP38Q8NB14 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
USP38Q8NB14 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.63■□□□□ 0.73
USP38Q8NB14 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.63■□□□□ 0.73
USP38Q8NB14 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP38Q8NB14 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms