Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIML2Q8N7C3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 AC006116.8-202ENST00000587620 1550 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 DUTP2-201ENST00000519164 463 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 AL355075.4-201ENST00000554988 638 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 NAPSB-206ENST00000562112 1266 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 AC092865.7-201ENST00000641832 219 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 LINC00602-201ENST00000629776 2065 ntBASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIML2Q8N7C3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 AC022898.2-201ENST00000616822 1312 ntBASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 AP000523.1-201ENST00000398242 1049 ntBASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIML2Q8N7C3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIML2Q8N7C3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms