Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 AC116407.4-201ENST00000623319 1061 ntBASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 PKD1P5-201ENST00000532415 10291 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 COX5BP2-201ENST00000392354 334 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 PCED1CP-201ENST00000419887 785 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 AC005104.2-201ENST00000427818 678 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CHCHD2P8-201ENST00000429873 447 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 AC246785.2-201ENST00000432512 513 ntBASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TTC9CQ8N5M4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TTC9CQ8N5M4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.92□□□□□ -0.18
TTC9CQ8N5M4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms