Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 AC073592.5-201ENST00000624854 528 ntBASIC18.72■□□□□ 0.59
TTC39CQ8N584 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 KLF4P1-201ENST00000412782 1185 ntBASIC18.71■□□□□ 0.59
TTC39CQ8N584 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 AP005117.1-201ENST00000584346 1413 ntBASIC18.71■□□□□ 0.59
TTC39CQ8N584 SIGLEC16-201ENST00000599858 1437 ntBASIC18.71■□□□□ 0.59
TTC39CQ8N584 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39CQ8N584 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39CQ8N584 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 DUSP5P1-201ENST00000441325 1139 ntBASIC18.7■□□□□ 0.58
TTC39CQ8N584 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 STK19B-204ENST00000512515 211 ntBASIC18.7■□□□□ 0.58
TTC39CQ8N584 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 REXO1L6P-202ENST00000619970 1078 ntBASIC18.7■□□□□ 0.58
TTC39CQ8N584 AC073592.4-201ENST00000623827 446 ntBASIC18.7■□□□□ 0.58
TTC39CQ8N584 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TTC39CQ8N584 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39CQ8N584 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AL133373.2-201ENST00000623187 2828 ntBASIC18.69■□□□□ 0.58
TTC39CQ8N584 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AC016396.2-201ENST00000562575 1417 ntBASIC18.69■□□□□ 0.58
TTC39CQ8N584 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.69■□□□□ 0.58
TTC39CQ8N584 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AL732292.2-201ENST00000609649 430 ntBASIC18.69■□□□□ 0.58
TTC39CQ8N584 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39CQ8N584 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TTC39CQ8N584 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 AC009336.1-201ENST00000608941 1553 ntBASIC18.68■□□□□ 0.58
TTC39CQ8N584 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms