Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 AL662844.1-201ENST00000546340 181 ntBASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 MTDHP4-201ENST00000600287 670 ntBASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 AL139327.4-201ENST00000612362 153 ntBASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF39Q8N4T4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 AL773604.1-201ENST00000617417 272 ntBASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 FAM215A-202ENST00000632077 792 ntBASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ARHGEF39Q8N4T4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 AC067852.2-201ENST00000590513 2313 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 GNAS-203ENST00000306120 1878 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 AF186996.4-201ENST00000467186 377 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 AC073648.2-201ENST00000510116 352 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 STK19B-204ENST00000512515 211 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 AC064862.7-201ENST00000604520 867 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 MIR7706-201ENST00000613747 67 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 AC107918.4-202ENST00000641623 219 ntBASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms