Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.27■□□□□ 0.51
SCML4Q8N228 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.27■□□□□ 0.51
SCML4Q8N228 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCML4Q8N228 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
SCML4Q8N228 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCML4Q8N228 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCML4Q8N228 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCML4Q8N228 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCML4Q8N228 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SCML4Q8N228 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SCML4Q8N228 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.26■□□□□ 0.51
SCML4Q8N228 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.26■□□□□ 0.51
SCML4Q8N228 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.26■□□□□ 0.51
SCML4Q8N228 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.26■□□□□ 0.51
SCML4Q8N228 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.26■□□□□ 0.51
SCML4Q8N228 AC107918.4-202ENST00000641623 219 ntBASIC18.26■□□□□ 0.51
SCML4Q8N228 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SCML4Q8N228 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.26■□□□□ 0.51
SCML4Q8N228 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCML4Q8N228 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 AC016396.2-201ENST00000562575 1417 ntBASIC18.25■□□□□ 0.51
SCML4Q8N228 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.25■□□□□ 0.51
SCML4Q8N228 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 LAGE3P1-201ENST00000425356 484 ntBASIC18.25■□□□□ 0.51
SCML4Q8N228 AC009078.2-202ENST00000463353 338 ntBASIC18.25■□□□□ 0.51
SCML4Q8N228 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.25■□□□□ 0.51
SCML4Q8N228 RNA5SP419-201ENST00000515908 135 ntBASIC18.25■□□□□ 0.51
SCML4Q8N228 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML4Q8N228 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SCML4Q8N228 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML4Q8N228 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 AL773604.1-201ENST00000617417 272 ntBASIC18.25■□□□□ 0.51
SCML4Q8N228 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML4Q8N228 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SCML4Q8N228 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML4Q8N228 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML4Q8N228 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML4Q8N228 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.24■□□□□ 0.51
SCML4Q8N228 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SCML4Q8N228 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCML4Q8N228 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 MRPL3P1-201ENST00000400109 1033 ntBASIC18.24■□□□□ 0.51
SCML4Q8N228 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 AC026396.1-201ENST00000419388 421 ntBASIC18.24■□□□□ 0.51
SCML4Q8N228 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.24■□□□□ 0.51
SCML4Q8N228 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML4Q8N228 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.24■□□□□ 0.51
SCML4Q8N228 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SCML4Q8N228 AC005332.8-201ENST00000622750 2735 ntBASIC18.24■□□□□ 0.51
SCML4Q8N228 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms