Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC011676.5-201ENST00000624864 2660 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 LYSMD4-203ENST00000378904 2122 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC022211.2-201ENST00000585075 2527 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 MYCLP1-201ENST00000372451 1075 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AL158047.1-201ENST00000445918 881 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC112698.1-201ENST00000510299 916 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 Z99916.2-201ENST00000604037 246 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AL157888.1-201ENST00000631930 593 ntBASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01561Q8N1V8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
LINC01561Q8N1V8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TSPY12P-201ENST00000421279 868 ntBASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 AC098590.1-201ENST00000468126 897 ntBASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms