Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.1■□□□□ 0.65
VPS52Q8N1B4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 AC098831.1-202ENST00000438821 336 ntBASIC19.1■□□□□ 0.65
VPS52Q8N1B4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 NKAPP1-205ENST00000585790 367 ntBASIC19.1■□□□□ 0.65
VPS52Q8N1B4 AC027601.4-201ENST00000611259 610 ntBASIC19.1■□□□□ 0.65
VPS52Q8N1B4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
VPS52Q8N1B4 AC020916.1-201ENST00000587762 1774 ntBASIC19.09■□□□□ 0.65
VPS52Q8N1B4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS52Q8N1B4 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 PGAM5P1-201ENST00000518923 814 ntBASIC19.08■□□□□ 0.64
VPS52Q8N1B4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 MTDHP4-201ENST00000600287 670 ntBASIC19.08■□□□□ 0.64
VPS52Q8N1B4 AC140113.2-201ENST00000604370 208 ntBASIC19.08■□□□□ 0.64
VPS52Q8N1B4 AC008735.5-201ENST00000623544 497 ntBASIC19.08■□□□□ 0.64
VPS52Q8N1B4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS52Q8N1B4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms